GetFEM  5.4.2
gmm_lapack_interface.h
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31 
32 /**@file gmm_lapack_interface.h
33  @author Yves Renard <[email protected]>
34  @date October 7, 2003.
35  @brief gmm interface for LAPACK
36 */
37 
38 #ifndef GMM_LAPACK_INTERFACE_H
39 #define GMM_LAPACK_INTERFACE_H
40 
41 #include "gmm_blas_interface.h"
42 #include "gmm_dense_lu.h"
43 #include "gmm_dense_qr.h"
44 
45 
46 #if defined(GMM_USES_LAPACK)
47 
48 namespace gmm {
49 
50  /* ********************************************************************** */
51  /* Operations interfaced for T = float, double, std::complex<float> */
52  /* or std::complex<double> : */
53  /* */
54  /* lu_factor(dense_matrix<T>, std::vector<long>) */
55  /* lu_solve(dense_matrix<T>, std::vector<T>, std::vector<T>) */
56  /* lu_solve(dense_matrix<T>, std::vector<long>, std::vector<T>, */
57  /* std::vector<T>) */
58  /* lu_solve_transposed(dense_matrix<T>, std::vector<long>, std::vector<T>,*/
59  /* std::vector<T>) */
60  /* lu_inverse(dense_matrix<T>) */
61  /* lu_inverse(dense_matrix<T>, std::vector<long>, dense_matrix<T>) */
62  /* */
63  /* qr_factor(dense_matrix<T>, dense_matrix<T>, dense_matrix<T>) */
64  /* */
65  /* implicit_qr_algorithm(dense_matrix<T>, std::vector<T>) */
66  /* implicit_qr_algorithm(dense_matrix<T>, std::vector<T>, */
67  /* dense_matrix<T>) */
68  /* implicit_qr_algorithm(dense_matrix<T>, std::vector<std::complex<T> >) */
69  /* implicit_qr_algorithm(dense_matrix<T>, std::vector<std::complex<T> >, */
70  /* dense_matrix<T>) */
71  /* */
72  /* geev_interface_right */
73  /* geev_interface_left */
74  /* */
75  /* schur(dense_matrix<T>, dense_matrix<T>, dense_matrix<T>) */
76  /* */
77  /* svd(dense_matrix<T>, dense_matrix<T>, dense_matrix<T>, std::vector<T>) */
78  /* svd(dense_matrix<T>, dense_matrix<T>, dense_matrix<T>, */
79  /* std::vector<std::complex<T> >) */
80  /* */
81  /* ********************************************************************** */
82 
83  /* ********************************************************************** */
84  /* LAPACK functions used. */
85  /* ********************************************************************** */
86 
87  extern "C" {
88  void sgetrf_(...); void dgetrf_(...); void cgetrf_(...); void zgetrf_(...);
89  void sgetrs_(...); void dgetrs_(...); void cgetrs_(...); void zgetrs_(...);
90  void sgetri_(...); void dgetri_(...); void cgetri_(...); void zgetri_(...);
91  void sgeqrf_(...); void dgeqrf_(...); void cgeqrf_(...); void zgeqrf_(...);
92  void sorgqr_(...); void dorgqr_(...); void cungqr_(...); void zungqr_(...);
93  void sormqr_(...); void dormqr_(...); void cunmqr_(...); void zunmqr_(...);
94  void sgees_ (...); void dgees_ (...); void cgees_ (...); void zgees_ (...);
95  void sgeev_ (...); void dgeev_ (...); void cgeev_ (...); void zgeev_ (...);
96  void sgeesx_(...); void dgeesx_(...); void cgeesx_(...); void zgeesx_(...);
97  void sgesvd_(...); void dgesvd_(...); void cgesvd_(...); void zgesvd_(...);
98  }
99 
100  /* ********************************************************************** */
101  /* LU decomposition. */
102  /* ********************************************************************** */
103 
104 # define getrf_interface(lapack_name, base_type) inline \
105  size_type lu_factor(dense_matrix<base_type > &A, lapack_ipvt &ipvt){ \
106  GMMLAPACK_TRACE("getrf_interface"); \
107  BLAS_INT m = BLAS_INT(mat_nrows(A)), n = BLAS_INT(mat_ncols(A)), lda(m); \
108  long info(-1L); \
109  if (m && n) lapack_name(&m, &n, &A(0,0), &lda, ipvt.pfirst(), &info); \
110  if ((sizeof(BLAS_INT) == 4) || \
111  ((info & 0xFFFFFFFF00000000L) && !(info & 0x00000000FFFFFFFFL))) \
112  /* For compatibility with lapack version with 32 bit integer. */ \
113  ipvt.set_to_int32(); \
114  return size_type(int(info & 0x00000000FFFFFFFFL)); \
115  }
116 
117  getrf_interface(sgetrf_, BLAS_S)
118  getrf_interface(dgetrf_, BLAS_D)
119  getrf_interface(cgetrf_, BLAS_C)
120  getrf_interface(zgetrf_, BLAS_Z)
121 
122  /* ********************************************************************* */
123  /* LU solve. */
124  /* ********************************************************************* */
125 
126 # define getrs_interface(f_name, trans1, lapack_name, base_type) inline \
127  void f_name(const dense_matrix<base_type > &A, \
128  const lapack_ipvt &ipvt, std::vector<base_type > &x, \
129  const std::vector<base_type > &b) { \
130  GMMLAPACK_TRACE("getrs_interface"); \
131  BLAS_INT n = BLAS_INT(mat_nrows(A)), info(0), nrhs(1); \
132  gmm::copy(b, x); trans1; \
133  if (n) \
134  lapack_name(&t,&n,&nrhs,&(A(0,0)),&n,ipvt.pfirst(),&x[0],&n,&info); \
135  }
136 
137 # define getrs_trans_n const char t = 'N'
138 # define getrs_trans_t const char t = 'T'
139 
140  getrs_interface(lu_solve, getrs_trans_n, sgetrs_, BLAS_S)
141  getrs_interface(lu_solve, getrs_trans_n, dgetrs_, BLAS_D)
142  getrs_interface(lu_solve, getrs_trans_n, cgetrs_, BLAS_C)
143  getrs_interface(lu_solve, getrs_trans_n, zgetrs_, BLAS_Z)
144  getrs_interface(lu_solve_transposed, getrs_trans_t, sgetrs_, BLAS_S)
145  getrs_interface(lu_solve_transposed, getrs_trans_t, dgetrs_, BLAS_D)
146  getrs_interface(lu_solve_transposed, getrs_trans_t, cgetrs_, BLAS_C)
147  getrs_interface(lu_solve_transposed, getrs_trans_t, zgetrs_, BLAS_Z)
148 
149  /* ********************************************************************* */
150  /* LU inverse. */
151  /* ********************************************************************* */
152 
153 # define getri_interface(lapack_name, base_type) inline \
154  void lu_inverse(const dense_matrix<base_type > &LU, \
155  const lapack_ipvt &ipvt, const dense_matrix<base_type > &A_) { \
156  GMMLAPACK_TRACE("getri_interface"); \
157  dense_matrix<base_type >& \
158  A = const_cast<dense_matrix<base_type > &>(A_); \
159  BLAS_INT n = BLAS_INT(mat_nrows(A)), info(0), lwork(-1); \
160  base_type work1; \
161  if (n) { \
162  gmm::copy(LU, A); \
163  lapack_name(&n, &A(0,0), &n, ipvt.pfirst(), &work1, &lwork, &info); \
164  lwork = int(gmm::real(work1)); \
165  std::vector<base_type> work(lwork); \
166  lapack_name(&n, &A(0,0), &n, ipvt.pfirst(), &work[0], &lwork,&info); \
167  } \
168  }
169 
170  getri_interface(sgetri_, BLAS_S)
171  getri_interface(dgetri_, BLAS_D)
172  getri_interface(cgetri_, BLAS_C)
173  getri_interface(zgetri_, BLAS_Z)
174 
175  /* ********************************************************************** */
176  /* QR factorization. */
177  /* ********************************************************************** */
178 
179 # define geqrf_interface(lapack_name1, base_type) inline \
180  void qr_factor(dense_matrix<base_type > &A){ \
181  GMMLAPACK_TRACE("geqrf_interface"); \
182  BLAS_INT m = BLAS_INT(mat_nrows(A)), n=BLAS_INT(mat_ncols(A)); \
183  BLAS_INT info(0), lwork(-1); \
184  base_type work1; \
185  if (m && n) { \
186  std::vector<base_type > tau(n); \
187  lapack_name1(&m, &n, &A(0,0), &m, &tau[0], &work1 , &lwork, &info); \
188  lwork = BLAS_INT(gmm::real(work1)); \
189  std::vector<base_type > work(lwork); \
190  lapack_name1(&m, &n, &A(0,0), &m, &tau[0], &work[0], &lwork, &info); \
191  GMM_ASSERT1(!info, "QR factorization failed"); \
192  } \
193  }
194 
195  geqrf_interface(sgeqrf_, BLAS_S)
196  geqrf_interface(dgeqrf_, BLAS_D)
197  // For complex values, housholder vectors are not the same as in
198  // gmm::lu_factor. Impossible to interface for the moment.
199  // geqrf_interface(cgeqrf_, BLAS_C)
200  // geqrf_interface(zgeqrf_, BLAS_Z)
201 
202 # define geqrf_interface2(lapack_name1, lapack_name2, base_type) inline \
203  void qr_factor(const dense_matrix<base_type > &A, \
204  dense_matrix<base_type > &Q, dense_matrix<base_type > &R) { \
205  GMMLAPACK_TRACE("geqrf_interface2"); \
206  BLAS_INT m = BLAS_INT(mat_nrows(A)), n=BLAS_INT(mat_ncols(A)); \
207  BLAS_INT info(0), lwork(-1); \
208  base_type work1; \
209  if (m && n) { \
210  std::copy(A.begin(), A.end(), Q.begin()); \
211  std::vector<base_type > tau(n); \
212  lapack_name1(&m, &n, &Q(0,0), &m, &tau[0], &work1 , &lwork, &info); \
213  lwork = BLAS_INT(gmm::real(work1)); \
214  std::vector<base_type > work(lwork); \
215  lapack_name1(&m, &n, &Q(0,0), &m, &tau[0], &work[0], &lwork, &info); \
216  GMM_ASSERT1(!info, "QR factorization failed"); \
217  base_type *p = &R(0,0), *q = &Q(0,0); \
218  for (BLAS_INT j = 0; j < n; ++j, q += m-n) \
219  for (BLAS_INT i = 0; i < n; ++i, ++p, ++q) \
220  *p = (j < i) ? base_type(0) : *q; \
221  lapack_name2(&m, &n, &n, &Q(0,0), &m,&tau[0],&work[0],&lwork,&info); \
222  } \
223  else gmm::clear(Q); \
224  }
225 
226  geqrf_interface2(sgeqrf_, sorgqr_, BLAS_S)
227  geqrf_interface2(dgeqrf_, dorgqr_, BLAS_D)
228  geqrf_interface2(cgeqrf_, cungqr_, BLAS_C)
229  geqrf_interface2(zgeqrf_, zungqr_, BLAS_Z)
230 
231  /* ********************************************************************** */
232  /* QR algorithm for eigenvalues search. */
233  /* ********************************************************************** */
234 
235 # define gees_interface(lapack_name, base_type) \
236  template <typename VECT> inline void implicit_qr_algorithm( \
237  const dense_matrix<base_type > &A, const VECT &eigval_, \
238  dense_matrix<base_type > &Q, \
239  double tol=gmm::default_tol(base_type()), bool compvect = true) { \
240  GMMLAPACK_TRACE("gees_interface"); \
241  typedef bool (*L_fp)(...); L_fp p = 0; \
242  BLAS_INT n=BLAS_INT(mat_nrows(A)), info(0), lwork(-1), sdim; \
243  base_type work1; \
244  if (!n) return; \
245  dense_matrix<base_type > H(n,n); gmm::copy(A, H); \
246  char jobvs = (compvect ? 'V' : 'N'), sort = 'N'; \
247  std::vector<double> rwork(n), eigv1(n), eigv2(n); \
248  lapack_name(&jobvs, &sort, p, &n, &H(0,0), &n, &sdim, &eigv1[0], \
249  &eigv2[0], &Q(0,0), &n, &work1, &lwork, &rwork[0], &info); \
250  lwork = BLAS_INT(gmm::real(work1)); \
251  std::vector<base_type > work(lwork); \
252  lapack_name(&jobvs, &sort, p, &n, &H(0,0), &n, &sdim, &eigv1[0], \
253  &eigv2[0], &Q(0,0), &n, &work[0], &lwork, &rwork[0],&info);\
254  GMM_ASSERT1(!info, "QR algorithm failed"); \
255  extract_eig(H, const_cast<VECT &>(eigval_), tol); \
256  }
257 
258 # define gees_interface2(lapack_name, base_type) \
259  template <typename VECT> inline void implicit_qr_algorithm( \
260  const dense_matrix<base_type > &A, const VECT &eigval_, \
261  dense_matrix<base_type > &Q, \
262  double tol=gmm::default_tol(base_type()), bool compvect = true) { \
263  GMMLAPACK_TRACE("gees_interface2"); \
264  typedef bool (*L_fp)(...); L_fp p = 0; \
265  BLAS_INT n=BLAS_INT(mat_nrows(A)), info(0), lwork(-1), sdim; \
266  base_type work1; \
267  if (!n) return; \
268  dense_matrix<base_type > H(n,n); gmm::copy(A, H); \
269  char jobvs = (compvect ? 'V' : 'N'), sort = 'N'; \
270  std::vector<double> rwork(n), eigvv(n*2); \
271  lapack_name(&jobvs, &sort, p, &n, &H(0,0), &n, &sdim, &eigvv[0], \
272  &Q(0,0), &n, &work1, &lwork, &rwork[0], &rwork[0], &info); \
273  lwork = BLAS_INT(gmm::real(work1)); \
274  std::vector<base_type > work(lwork); \
275  lapack_name(&jobvs, &sort, p, &n, &H(0,0), &n, &sdim, &eigvv[0], \
276  &Q(0,0), &n, &work[0], &lwork, &rwork[0], &rwork[0],&info);\
277  GMM_ASSERT1(!info, "QR algorithm failed"); \
278  extract_eig(H, const_cast<VECT &>(eigval_), tol); \
279  }
280 
281  gees_interface(sgees_, BLAS_S)
282  gees_interface(dgees_, BLAS_D)
283  gees_interface2(cgees_, BLAS_C)
284  gees_interface2(zgees_, BLAS_Z)
285 
286 
287 # define jobv_right char jobvl = 'N', jobvr = 'V';
288 # define jobv_left char jobvl = 'V', jobvr = 'N';
289 
290 # define geev_interface(lapack_name, base_type, side) \
291  template <typename VECT> inline void geev_interface_ ## side( \
292  const dense_matrix<base_type > &A, const VECT &eigval_, \
293  dense_matrix<base_type > &Q) { \
294  GMMLAPACK_TRACE("geev_interface"); \
295  BLAS_INT n = BLAS_INT(mat_nrows(A)), info(0), lwork(-1); \
296  base_type work1; \
297  if (!n) return; \
298  dense_matrix<base_type > H(n,n); gmm::copy(A, H); \
299  jobv_ ## side \
300  std::vector<base_type > eigvr(n), eigvi(n); \
301  lapack_name(&jobvl, &jobvr, &n, &H(0,0), &n, &eigvr[0], &eigvi[0], \
302  &Q(0,0), &n, &Q(0,0), &n, &work1, &lwork, &info); \
303  lwork = BLAS_INT(gmm::real(work1)); \
304  std::vector<base_type > work(lwork); \
305  lapack_name(&jobvl, &jobvr, &n, &H(0,0), &n, &eigvr[0], &eigvi[0], \
306  &Q(0,0), &n, &Q(0,0), &n, &work[0], &lwork, &info); \
307  GMM_ASSERT1(!info, "QR algorithm failed"); \
308  gmm::copy(eigvr, gmm::real_part(const_cast<VECT &>(eigval_))); \
309  gmm::copy(eigvi, gmm::imag_part(const_cast<VECT &>(eigval_))); \
310  }
311 
312 # define geev_interface2(lapack_name, base_type, side) \
313  template <typename VECT> inline void geev_interface_ ## side( \
314  const dense_matrix<base_type > &A, const VECT &eigval_, \
315  dense_matrix<base_type > &Q) { \
316  GMMLAPACK_TRACE("geev_interface"); \
317  BLAS_INT n = BLAS_INT(mat_nrows(A)), info(0), lwork(-1); \
318  base_type work1; \
319  if (!n) return; \
320  dense_matrix<base_type > H(n,n); gmm::copy(A, H); \
321  jobv_ ## side \
322  std::vector<base_type::value_type> rwork(2*n); \
323  std::vector<base_type> eigv(n); \
324  lapack_name(&jobvl, &jobvr, &n, &H(0,0), &n, &eigv[0], &Q(0,0), &n, \
325  &Q(0,0), &n, &work1, &lwork, &rwork[0], &info); \
326  lwork = BLAS_INT(gmm::real(work1)); \
327  std::vector<base_type > work(lwork); \
328  lapack_name(&jobvl, &jobvr, &n, &H(0,0), &n, &eigv[0], &Q(0,0), &n, \
329  &Q(0,0), &n, &work[0], &lwork, &rwork[0], &info); \
330  GMM_ASSERT1(!info, "QR algorithm failed"); \
331  gmm::copy(eigv, const_cast<VECT &>(eigval_)); \
332  }
333 
334  geev_interface(sgeev_, BLAS_S, right)
335  geev_interface(dgeev_, BLAS_D, right)
336  geev_interface2(cgeev_, BLAS_C, right)
337  geev_interface2(zgeev_, BLAS_Z, right)
338 
339  geev_interface(sgeev_, BLAS_S, left)
340  geev_interface(dgeev_, BLAS_D, left)
341  geev_interface2(cgeev_, BLAS_C, left)
342  geev_interface2(zgeev_, BLAS_Z, left)
343 
344 
345  /* ********************************************************************** */
346  /* SCHUR algorithm: */
347  /* A = Q*S*(Q^T), with Q orthogonal and S upper quasi-triangula */
348  /* ********************************************************************** */
349 
350 # define geesx_interface(lapack_name, base_type) inline \
351  void schur(dense_matrix<base_type> &A, \
352  dense_matrix<base_type> &S, \
353  dense_matrix<base_type> &Q) { \
354  GMMLAPACK_TRACE("geesx_interface"); \
355  BLAS_INT m = BLAS_INT(mat_nrows(A)), n = BLAS_INT(mat_ncols(A)); \
356  GMM_ASSERT1(m == n, "Schur decomposition requires square matrix"); \
357  char jobvs = 'V', sort = 'N', sense = 'N'; \
358  bool select = false; \
359  BLAS_INT lwork = 8*n, sdim = 0, liwork = 1; \
360  std::vector<base_type> work(lwork), wr(n), wi(n); \
361  std::vector<BLAS_INT> iwork(liwork); \
362  std::vector<BLAS_INT> bwork(1); \
363  resize(S, n, n); copy(A, S); \
364  resize(Q, n, n); \
365  base_type rconde(0), rcondv(0); \
366  BLAS_INT info(0); \
367  lapack_name(&jobvs, &sort, &select, &sense, &n, &S(0,0), &n, \
368  &sdim, &wr[0], &wi[0], &Q(0,0), &n, &rconde, &rcondv, \
369  &work[0], &lwork, &iwork[0], &liwork, &bwork[0], &info);\
370  GMM_ASSERT1(!info, "SCHUR algorithm failed"); \
371  }
372 
373 # define geesx_interface2(lapack_name, base_type) inline \
374  void schur(dense_matrix<base_type> &A, \
375  dense_matrix<base_type> &S, \
376  dense_matrix<base_type> &Q) { \
377  GMMLAPACK_TRACE("geesx_interface"); \
378  BLAS_INT m = BLAS_INT(mat_nrows(A)), n = BLAS_INT(mat_ncols(A)); \
379  GMM_ASSERT1(m == n, "Schur decomposition requires square matrix"); \
380  char jobvs = 'V', sort = 'N', sense = 'N'; \
381  bool select = false; \
382  BLAS_INT lwork = 8*n, sdim = 0; \
383  std::vector<base_type::value_type> rwork(lwork); \
384  std::vector<base_type> work(lwork), w(n); \
385  std::vector<BLAS_INT> bwork(1); \
386  resize(S, n, n); copy(A, S); \
387  resize(Q, n, n); \
388  base_type rconde(0), rcondv(0); \
389  BLAS_INT info(0); \
390  lapack_name(&jobvs, &sort, &select, &sense, &n, &S(0,0), &n, \
391  &sdim, &w[0], &Q(0,0), &n, &rconde, &rcondv, \
392  &work[0], &lwork, &rwork[0], &bwork[0], &info); \
393  GMM_ASSERT1(!info, "SCHUR algorithm failed"); \
394  }
395 
396  geesx_interface(sgeesx_, BLAS_S)
397  geesx_interface(dgeesx_, BLAS_D)
398  geesx_interface2(cgeesx_, BLAS_C)
399  geesx_interface2(zgeesx_, BLAS_Z)
400 
401  template <typename MAT>
402  void schur(const MAT &A_, MAT &S, MAT &Q) {
403  MAT A(A_);
404  schur(A, S, Q);
405  }
406 
407 
408  /* ********************************************************************** */
409  /* Interface to SVD. Does not correspond to a Gmm++ functionnality. */
410  /* Author : Sebastian Nowozin <[email protected]> */
411  /* ********************************************************************** */
412 
413 # define gesvd_interface(lapack_name, base_type) inline \
414  void svd(dense_matrix<base_type> &X, \
415  dense_matrix<base_type> &U, \
416  dense_matrix<base_type> &Vtransposed, \
417  std::vector<base_type> &sigma) { \
418  GMMLAPACK_TRACE("gesvd_interface"); \
419  BLAS_INT m = BLAS_INT(mat_nrows(X)), n = BLAS_INT(mat_ncols(X)); \
420  BLAS_INT mn_min = m < n ? m : n; \
421  sigma.resize(mn_min); \
422  std::vector<base_type> work(15 * mn_min); \
423  BLAS_INT lwork = BLAS_INT(work.size()); \
424  resize(U, m, m); \
425  resize(Vtransposed, n, n); \
426  char job = 'A'; \
427  BLAS_INT info(0); \
428  lapack_name(&job, &job, &m, &n, &X(0,0), &m, &sigma[0], &U(0,0), \
429  &m, &Vtransposed(0,0), &n, &work[0], &lwork, &info); \
430  }
431 
432 # define cgesvd_interface(lapack_name, base_type, base_type2) inline \
433  void svd(dense_matrix<base_type> &X, \
434  dense_matrix<base_type> &U, \
435  dense_matrix<base_type> &Vtransposed, \
436  std::vector<base_type2> &sigma) { \
437  GMMLAPACK_TRACE("gesvd_interface"); \
438  BLAS_INT m = BLAS_INT(mat_nrows(X)), n = BLAS_INT(mat_ncols(X)); \
439  BLAS_INT mn_min = m < n ? m : n; \
440  sigma.resize(mn_min); \
441  std::vector<base_type> work(15 * mn_min); \
442  std::vector<base_type2> rwork(5 * mn_min); \
443  BLAS_INT lwork = BLAS_INT(work.size()); \
444  resize(U, m, m); \
445  resize(Vtransposed, n, n); \
446  char job = 'A'; \
447  BLAS_INT info(0); \
448  lapack_name(&job, &job, &m, &n, &X(0,0), &m, &sigma[0], &U(0,0), \
449  &m, &Vtransposed(0,0), &n, &work[0], &lwork, \
450  &rwork[0], &info); \
451  }
452 
453  gesvd_interface(sgesvd_, BLAS_S)
454  gesvd_interface(dgesvd_, BLAS_D)
455  cgesvd_interface(cgesvd_, BLAS_C, BLAS_S)
456  cgesvd_interface(zgesvd_, BLAS_Z, BLAS_D)
457 
458  template <typename MAT, typename VEC>
459  void svd(const MAT &X_, MAT &U, MAT &Vtransposed, VEC &sigma) {
460  MAT X(X_);
461  svd(X, U, Vtransposed, sigma);
462  }
463 
464 
465 
466 
467 }
468 
469 #else
470 
471 namespace gmm
472 {
473 template <typename MAT>
474 void schur(const MAT &A_, MAT &S, MAT &Q)
475 {
476  GMM_ASSERT1(false, "Use of function schur(A,S,Q) requires GetFEM "
477  "to be built with Lapack");
478 }
479 
480 }// namespace gmm
481 
482 #endif // GMM_USES_LAPACK
483 
484 #endif // GMM_LAPACK_INTERFACE_H
gmm_dense_lu.h
LU factorizations and determinant computation for dense matrices.
gmm_blas_interface.h
gmm interface for fortran BLAS.
gmm_dense_qr.h
Dense QR factorization.